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silico-quantum/quantum-chem-skills

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5 stars 품질 57 트렌드 21MIT

Core quantum chemistry skills: PySCF, Multiwfn, xyzrender, MOMAP, RDKit, molecular sampling, xTB cluster MD — the foundation for silico-quantum pipelines

개요

Reusable agent skills, reference notes, and small helper scripts for computational chemistry workflows. This repository is a toolbox, not a single Python package. Each installable skill is a directory containing a SKILL.md; some skills also include reference material or executable helpers. Install only the skills you need, then install their scientific software dependencies separately. The repository also contains tadf-screening/, a local Stage 4 MOMAP adapter and example assets. It is not the complete four-stage screening pipeline. See the external silico-quantum/tadf-screening repository for the end-to-end workflow. Clone the repository and choose a skill directory. The following Codex example installs pyscf by symbolic link so repository updates are reflected without copying files: Use a different destination for each agent client: OpenClaw applies realpath-containment checks to workspace and project skill roots.

README

원문 README의 일부입니다. 원문 보기.

Quantum Chemistry Skills

Reusable agent skills, reference notes, and small helper scripts for computational chemistry workflows.

This repository is a toolbox, not a single Python package. Each installable skill is a directory containing a SKILL.md; some skills also include reference material or executable helpers. Install only the skills you need, then install their scientific software dependencies separately.

Skills

Skill Primary use External software commonly required
gaussian Gaussian input, job, and analysis guidance Licensed Gaussian installation
molecular-orbital-analysis Indexed orbital cubes and visualization PySCF; cube viewer; optional Multiwfn
molecular-sampler Extract and sample molecular assemblies Python 3.10+ standard library
momap MOMAP EVC, spectrum, and ISC workflows Licensed MOMAP and Gaussian installations
multiwfn Wavefunction and real-space analysis Multiwfn
pyscf Electronic-structure calculations with PySCF PySCF, NumPy, SciPy
rdkit-chemistry Molecular construction, conformers, and descriptors RDKit
xtb-cluster-md Cluster construction and xTB/GFN-FF dynamics xTB; optional plotting packages
xyzrender Molecular and orbital visualization xyzrender

The repository also contains tadf-screening/, a local Stage 4 MOMAP adapter and example assets. It is not the complete four-stage screening pipeline. See the external silico-quantum/tadf-screening repository for the end-to-end workflow.

Install a Skill

Clone the repository and choose a skill directory. The following Codex example installs pyscf by symbolic link so repository updates are reflected without copying files:

git clone https://github.com/silico-quantum/quantum-chem-skills.git
cd quantum-chem-skills
mkdir -p /path/to/project/.agents/skills
test ! -e /path/to/project/.agents/skills/pyscf && \
  test ! -L /path/to/project/.agents/skills/pyscf || exit 1
ln -s "$PWD/pyscf" /path/to/project/.agents/skills/pyscf

Use a different destination for each agent client:

Agent client Project or workspace scope Personal scope
OpenAI Codex .agents/skills ~/.agents/skills
Claude Code .claude/skills ~/.claude/skills
GitHub에서 전체 README 보기

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설치

npx skillfish add silico-quantum/quantum-chem-skills
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