
u9401066/pubmed-search-mcp
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MCP SDK v2 server for PubMed and multi-source biomedical research, with resilient search, full text, citations, and tenant-safe deployment.
概要
A Domain-Driven Design (DDD) based MCP server that serves as an intelligent research assistant for AI agents, providing task-oriented literature search and analysis capabilities. - 🔧 - Streamlined PubMed, Europe PMC, CORE, NCBI database access, and the versioned - 🛡️ - Deploy once and serve many agents: per-tenant sessions, caches, and artifacts, bearer-token auth, and per-tenant fair-share limits. See DEPLOYMENT.md - 🖼️ - Pull figure captions, direct image URLs, and PDF links from PMC Open Access articles - 📘 - Browse the complete language-switchable handbook: user workflows, architecture, 41-tool reference, pipeline tutorials, source/broker contracts, integrations and operations, security, and deployment at u9401066.github.io/pubmed-search-mcp - 📖 - GitHub-native mirror of the same canonical documentation at github.
README
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PubMed Search MCP
Professional Literature Research Assistant for AI Agents - More than just an API wrapper
A Domain-Driven Design (DDD) based MCP server that serves as an intelligent research assistant for AI agents, providing task-oriented literature search and analysis capabilities.
✨ What’s Included:
- 🔧 41 MCP Tools - Streamlined PubMed, Europe PMC, CORE, NCBI database access, and the versioned Research Chronicle
- 🛡️ Multi-Agent Service Mode - Deploy once and serve many agents: per-tenant sessions, caches, and artifacts, bearer-token auth, and per-tenant fair-share limits. See DEPLOYMENT.md
- 🖼️ OA Figure Extraction - Pull figure captions, direct image URLs, and PDF links from PMC Open Access articles
- 📘 Docs Site - Browse the complete language-switchable handbook: user workflows, architecture, 41-tool reference, pipeline tutorials, source/broker contracts, integrations and operations, security, and deployment at u9401066.github.io/pubmed-search-mcp
- 📖 GitHub Wiki - GitHub-native mirror of the same canonical documentation at github.com/u9401066/pubmed-search-mcp/wiki
- 📚 26 Claude Skills - Ready-to-use workflow guides for AI agents (Claude Code-specific)
- 📖 Copilot Instructions - VS Code GitHub Copilot integration guide
- Research automation - Scheduled pipeline diffs/local notifications, Chronicle rebuild summaries, multi-seed citation snowballing, and opt-in session deduplication with
options="exclude_seen".
🌐 Language: English | 繁體中文
インストール
uvx pubmed-search-mcp設定
{
"mcpServers": {
"pubmed-search": {
"command": "uvx",
"args": ["pubmed-search-mcp"],
"env": {
"NCBI_EMAIL": "[email protected]"
}
}
}
}