scimate

Portable agent skills for High Performance Computing workflows across OpenFOAM, SU2, LS-DYNA, FEniCS, CalculiX, ElmerFEM, PETSc, hypre, Trilinos, LAMMPS, GROMACS, Quantum ESPRESSO, VASP, Gaussian, ParaView, and Gmsh, plus MPI, GPU, Spack, reproducible toolchains, and cluster orchestration.

Repository

• GitHub:

Canonical layout

• skills/ is the portable distribution surface.
• Each skill lives in skills//.
• Each skill keeps trigger metadata in SKILL.md and detailed knowledge in references/.
• agents/openai.yaml is included where it helps Codex-style UIs, but the skill content stays tool-neutral.
• skills-index.md is the repository-level catalog and navigation entry point.

Canonical maintained skill shape:

• SKILL.md
• agents/openai.yaml
• references/
• assets/templates/ when a reusable scaffold is worth keeping
• optional scripts/ when deterministic shared tooling belongs inside the skill

Compatibility target

This repository is structured so the same skill folders can be reused by:

• Codex and other AGENTS-aware tools that read SKILL.md
• Claude Code plugin-style or imported skill collections that expect skills//SKILL.md
• Other CLI agents that can load a skill folder and progressively read references

Install patterns

Use the normalized folders in skills/.

• Codex-style install: copy or sync skills// into $HOME/.codex/skills/
• Claude Code personal or project install: copy or sync skills// into $HOME/.claude/skills/ or .claude/skills/
• Claude Code plugin-style install: keep the repository layout and expose skills// from the plugin

Current skills

• hpc-openfoam
• hpc-foundations
• hpc-mpi
• hpc-toolchains
• hpc-spack
• hpc-gpu-stack
• hpc-gmsh
• hpc-fenics
• hpc-petsc
• hpc-hypre
• hpc-trilinos
• hpc-lammps
• hpc-gromacs
• hpc-su2
• hpc-ls-dyna
• hpc-quantum-espresso
• hpc-vasp
• hpc-gaussian
• hpc-calculix
• hpc-elmerfem
• hpc-paraview
• hpc-orchestration

New skill spotlight

• hpc-ls-dyna adds a production-grade LS-DYNA skill with progressive references for explicit and implicit structural workflows, contact and preload strategy, thermal and welding workflows, SPH, ALE/S-ALE, ICFD, EM, NVH, and source-first advanced branches such as DEM, CESE, IGA, and EFG.
• The skill also includes starter decks plus minimal project skeletons under skills/hpc-ls-dyna/assets/templates/ and skills/hpc-ls-dyna/assets/templates/examples/, so users can start from either a single-file scaffold or a multi-file include-tree layout.

See skills-index.md for category-based navigation, template inventory, and skill selection guidance.

Lifecycle Coverage

Repository-level scheduler, monitoring, transfer, remote-development, profiling, and workflow-lifecycle support now lives in skills/hpc-orchestration/SKILL.md, so cluster operations are part of the same canonical skills/ surface as solver-specific packages.